Projects involving Microbes

Def­i­n­i­tion: Microbes are defined as micro­scop­ic organ­isms agents includ­ing bac­te­ria, archaea, pro­tists, fun­gi includ­ing molds, par­a­sites, virus­es and viroids. Microbes can be path­o­gen­ic (dis­ease causing). 

ALL projects involv­ing research with microbes must be pre-approved by the Los Ange­les Coun­ty Sci­ence Review Com­mit­tee (SRC) before exper­i­men­ta­tion is begun.

Pro­hib­it­ed Research

  1. Stud­ies involv­ing path­o­gen­ic or poten­tial­ly path­o­gen­ic agents are pro­hib­it­ed from being con­duct­ed in a home envi­ron­ment. In oth­er words, microbes may not be grown or cul­tured at home. These types of stud­ies can only be con­duct­ed under the direct super­vi­sion of an expe­ri­enced bio­med­ical sci­en­tist or des­ig­nat­ed adult super­vi­sor in an insti­tu­tion­al lab­o­ra­to­ry, includ­ing a school, if facil­i­ties are ade­quate and appropriate.
    Though cul­tures may not be grown at home, stu­dents
    MAY col­lect spec­i­mens at home.
  2. Lab­o­ra­to­ry stud­ies uti­liz­ing MRSA (Methi­cillin-resis­tant Staphy­lo­coc­cus aureus) and VRE (Van­comycin-Resis­tant Ente­ro­coc­cus) are pro­hib­it­ed. Microbes KNOWN to be path­o­gen­ic are not to be cul­tured. Pure cul­tures of non-path­o­gen­ic microor­gan­isms should be used in experiments.
  3. Stud­ies intend­ed to pro­duce microbes with mul­ti­ple antibi­ot­ic resis­tance are pro­hib­it­ed.
  4. Micro­bial stud­ies must be con­duct­ed in a prop­er­ly equipped school or insti­tu­tion­al lab­o­ra­to­ry under qual­i­fied adult super­vi­sion. No exper­i­men­ta­tion using exist­ing antibi­ot­ic-resis­tant microor­gan­isms may be con­duct­ed unless strains are aux­otroph­ic as well. Aux­otroph­ic microbes can­not sur­vive unless they’re grown on a spe­cial medi­um which con­tains essen­tial amino acids that they are inca­pable of pro­duc­ing. They die any­where out­side the Petri dish. Lab Kits for AP Sci­ence cours­es from dis­trict-approved Sci­en­tif­ic Sup­ply Hous­es only pro­vide bac­te­r­i­al strains that are auxotrophic.
  5. Stu­dents may NOT be direct­ly involved in the obtain­ing of microbes (excep­tion: microbe col­lec­tion in the envi­ron­ment using ster­ile swabs and appro­pri­ate col­lec­tion tech­niques and supervision.

Safe­ty Precautions 

These safe­ty pre­cau­tions are intend­ed for exper­i­men­tal activ­i­ties involv­ing any microbes. Even non­path­o­gen­ic microbes may cause dis­ease if they enter the body acci­den­tal­ly. Auto­clave or dis­in­fect all waste mate­r­i­al; dis­in­fect work areas with 10% bleach, use gloves and goggles.

Reg­u­la­tions and Supervision

The stu­dent and Des­ig­nat­ed Adult Super­vi­sor may con­sult with the Bio­med­ical Sci­en­tist (if required)  for detailed guid­ance in the tech­niques to be used by the stu­dent under the direct con­tin­u­ous super­vi­sion of the Des­ig­nat­ed Adult Super­vi­sor.  The Bio­med­ical Sci­en­tist or Des­ig­nat­ed Adult Super­vi­sor must be in the same local­i­ty as the stu­dent for the length of the exper­i­men­tal work.

The fol­low­ing are exam­ples of pre­cau­tions that must be tak­en to pre­vent injury to per­sons or the envi­ron­ment. No list could pos­si­bly fore­see all pos­si­ble haz­ards, so teach­ers, par­ents and stu­dents must care­ful­ly plan and fol­low safe pro­ce­dures spe­cif­ic to each study. The meth­ods and mate­ri­als sec­tion of the project descrip­tion must con­tain explic­it and detailed state­ments as to how and where exper­i­ments will be conducted. 

  1. All cul­tures in Petri dish­es must be bound togeth­er with trans­par­ent tape, imme­di­ate­ly after exposure/inoculation. Any Petri dish that con­tains fungus/mold should be taped shut all the way around the edges. Exam­ine through lids only.
  2. Inoc­u­lat­ing loops must be used with care. Wire loops used for trans­fer­ring bac­te­ria cul­tures should be flamed until the entire wire is red hot before and after each trans­fer is made. Petri dish­es that are inoc­u­lat­ed with mate­ri­als con­tain­ing unknown microor­gan­isms (i.e the mate­r­i­al might not be a pure non-path­o­gen­ic cul­ture) must not con­tain blood agar or Brain Heart Infu­sion (BHI) Broth but rather nutri­ent or tryp­ti­case soy agar.
  3. These safe­ty pre­cau­tions are intend­ed for exper­i­men­tal activ­i­ties involv­ing any bac­te­ria or fun­gi. Even non­path­o­gen­ic microbes may cause dis­ease if they enter the body acci­den­tal­ly. Auto­clave or dis­in­fect all waste mate­r­i­al; dis­in­fect work areas with 10% bleach, use gloves and goggles.

    Glass Petri dish­es: to ster­il­ize plates before clean­ing or dis­pos­al, fol­low these steps:
    • Auto­clave the unopened plates in the usu­al man­ner. Usu­al­ly, steam­ing at a pres­sure of 15 pounds per square inch for 15 to 20 min­utes kills most microbes. How­ev­er, to ster­il­ize soil sam­ples or large vol­umes of cul­ture, con­tin­ue with the pro­ce­dure described below. 
    • Wait one day for any resis­tant spores to leave the rest­ing stage and begin to grow, ster­il­ize a sec­ond time. 
    • Wait one more day, ster­il­ize a third time — dis­card ster­il­ized cul­tures in the reg­u­lar trash.Dis­pos­able plas­tic petri dish­es: place unopened, sealed dish­es in Bio­haz­ard dis­pos­al bags (includ­ed in Sci­ence Sup­ply kits for E.coli and molds) and use Dis­trict pick-up of bags as haz­ardous waste. Calls to near­by uni­ver­si­ties and hos­pi­tals can also yield a place to dis­pose of micro­bial waste.All cul­tured mate­ri­als must be auto­claved at the end of exper­i­men­ta­tion accord­ing to the rec­om­mend­ed pro­ce­dures in the Sci­ence Safe­ty Hand­book for CA Pub­lic Schools (2014 edi­tion). Excep­tion: Cul­tures of pure, non-path­o­gen­ic bac­te­ria grown in plas­tic Petri dish­es (usu­al­ly obtained through Sci­ence Sup­ply Com­pa­ny kits) can be cov­ered with a 10% bleach solu­tion and allowed to soak for at least 1 to 2 hours. Dis­card in the reg­u­lar trash.Ster­il­iz­ing plates of pure, non-path­o­gen­ic bac­te­r­i­al cul­tures: the mate­ri­als can be cov­ered with a 10% bleach solu­tion and allowed to soak for at least 1 to 2 hours. Dis­card ster­il­ized cul­tures in the reg­u­lar trash.

      Oper­a­tion of Pres­sure Cook­er (instead of an auto­clave) for Sterilization:

    • Before using a pres­sure cook­er, the teacher should be famil­iar with direc­tions for its operation.
    • The safe­ty valve should be exam­ined to make sure it is in work­ing order.
    • The gauge pres­sure should be kept at or below a max­i­mum of 20 pounds per square inch.
    • The pres­sure should be returned to zero before the cov­er can be safe­ly removed.
    • The test stop­cock should be opened before the clamp can be safe­ly released.
    • An eye-pro­tec­tive device should be used when work­ing with a pres­sure cooker.

4. Exper­i­men­ta­tion with molds or oth­er fun­gi must take place in a fume hood or open-air area (to pre­vent con­t­a­m­i­na­tion of liv­ing areas with fun­gal spores or expo­sure to aller­gens). If any­one in the area has a dam­aged immune sys­tem or any aller­gies, exper­i­ments with molds/fungi must be con­duct­ed in a lab­o­ra­to­ry. Con­tain­ers must be sealed air­tight at all times dur­ing obser­va­tions and dis­posed of as pos­si­ble pathogens.

Waste Dis­pos­al

 Exper­i­men­ta­tion must include prop­er dis­pos­al meth­ods for the chemicals/materials used in an exper­i­ment. The CA Sci­ence Safe­ty Hand­book describes safe waste dis­pos­al for sub­stances used in the lab.

The Flinn Sci­en­tif­ic Cat­a­log pro­vides good infor­ma­tion for the prop­er dis­pos­al of chem­i­cals. If applic­a­ble, the stu­dent researcher must incor­po­rate in the research plan dis­pos­al pro­ce­dure required by fed­er­al and state guidelines. 

Below are the resources need­ed for Research involv­ing Microbes:

  • Microbes Online Pre-Approval tem­plate (This is a fil­l­able PDF. Please down­load this doc­u­ment to your device and enter your respons­es in the giv­en box­es. You do not need to com­plete the form in one sit­ting. Choose Save to save your progress. Once you com­plete the form, get it approved by your adult super­vi­sor and site coor­di­na­tor BEFORE you go online to com­plete the online pre-approval form. You can then copy and paste your respons­es in the appro­pri­ate sec­tions of the online form.)

In addi­tion, Senior Divi­sion stu­dents need to com­plete the ISEF Human Informed Con­sent form and bring them to the fair.